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Mouse (GRCm39)
Description

intersectin 1 (SH3 domain protein 1A) [Source:MGI Symbol;Acc:MGI:1338069]

Gene Synonyms

EHSH1, Eh domain, SH3 domain regulator of endocytosis 1, Ese1, Intersectin-L, Sh3p17

Location
About this transcript

This transcript has 29 exons, is annotated with 72 domains and features, is associated with 7624 variant alleles and maps to 480 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000114002.10Itsn1-208140841714aaENSMUSP00000109635.3
 
Protein coding
CCDS37402Q9Z0R4-1 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS ALT1TSL:5
ENSMUST00000064797.13Itsn1-202140991719aaENSMUSP00000066361.6
 
Protein coding
E9Q0N0 GENCODE BasicAPPRIS P3TSL:5
ENSMUST00000525191.1Itsn1-233140871715aaENSMUSP00000303554.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525199.1Itsn1-241140061688aaENSMUSP00000303562.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525190.1Itsn1-232139881682aaENSMUSP00000303553.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525193.1Itsn1-235139851681aaENSMUSP00000303556.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525197.1Itsn1-239138711643aaENSMUSP00000303560.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000231852.3Itsn1-2299823279aaENSMUSP00000156129.2
 
Protein coding
A0A338P7I4 GENCODE Basic
ENSMUST00000231735.3Itsn1-2289698279aaENSMUSP00000156289.2
 
Protein coding
A0A338P7I4 GENCODE Basic
ENSMUST00000095909.11Itsn1-2036192621aaENSMUSP00000093598.4
 
Protein coding
CCDS49914Q6NZJ5 GENCODE PrimaryGENCODE BasicTSL:1
ENSMUST00000559164.1Itsn1-27757101213aaENSMUSP00000337527.1
 
Protein coding
CCDS49913-GENCODE Basic
ENSMUST00000525207.1Itsn1-24955841213aaENSMUSP00000303570.1
 
Protein coding
CCDS49913-GENCODE Basic
ENSMUST00000525218.1Itsn1-26055161213aaENSMUSP00000303581.1
 
Protein coding
CCDS49913-GENCODE Basic
ENSMUST00000113999.9Itsn1-20654651218aaENSMUSP00000109632.2
 
Protein coding
E9Q3I5 GENCODE BasicTSL:5
ENSMUST00000525203.1Itsn1-24554631212aaENSMUSP00000303566.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000525204.1Itsn1-24654631212aaENSMUSP00000303567.1
 
Protein coding
-GENCODE Basic
ENSMUST00000056482.15Itsn1-20154541213aaENSMUSP00000056011.8
 
Protein coding
CCDS49913Q9Z0R4-2 GENCODE BasicTSL:1
ENSMUST00000525220.1Itsn1-26254411209aaENSMUSP00000303583.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525211.1Itsn1-25354241239aaENSMUSP00000303574.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525212.1Itsn1-25453601182aaENSMUSP00000303575.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525210.1Itsn1-25253501181aaENSMUSP00000303573.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525214.1Itsn1-25653441175aaENSMUSP00000303577.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525217.1Itsn1-25952731153aaENSMUSP00000303580.1
 
Protein coding
-GENCODE Basic
ENSMUST00000113996.9Itsn1-20552391142aaENSMUSP00000109629.2
 
Protein coding
E9Q3I8 GENCODE BasicTSL:5
ENSMUST00000525201.1Itsn1-24352071557aaENSMUSP00000303564.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525219.1Itsn1-26150481218aaENSMUSP00000303582.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000525226.1Itsn1-26843211213aaENSMUSP00000303589.1
 
Protein coding
CCDS49913-GENCODE Basic
ENSMUST00000113993.9Itsn1-20440981147aaENSMUSP00000109626.2
 
Protein coding
E9Q3I9 GENCODE BasicTSL:5
ENSMUST00000559170.1Itsn1-2834088621aaENSMUSP00000337533.1
 
Protein coding
CCDS49914-GENCODE Basic
ENSMUST00000114001.8Itsn1-20738981176aaENSMUSP00000109634.2
 
Protein coding
E9Q3I4 GENCODE BasicTSL:5
ENSMUST00000559166.1Itsn1-2793803909aaENSMUSP00000337529.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525233.1Itsn1-2753716584aaENSMUSP00000303596.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525223.1Itsn1-26535651017aaENSMUSP00000303586.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525228.1Itsn1-2703564914aaENSMUSP00000303591.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000525227.1Itsn1-2693550909aaENSMUSP00000303590.1
 
Protein coding
-GENCODE Basic
ENSMUST00000559168.1Itsn1-2813427872aaENSMUSP00000337531.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525224.1Itsn1-2663343980aaENSMUSP00000303587.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000525232.1Itsn1-2743093795aaENSMUSP00000303595.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000525231.1Itsn1-2732848807aaENSMUSP00000303594.1
 
Protein coding
-GENCODE Basic
ENSMUST00000525230.1Itsn1-2722840774aaENSMUSP00000303593.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000559169.1Itsn1-2822742730aaENSMUSP00000337532.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000135057.2Itsn1-2151110359aaENSMUSP00000117018.2
 
Protein coding
D3Z6P4 TSL:5CDS 3' incomplete
ENSMUST00000125052.8Itsn1-2101036346aaENSMUSP00000115985.2
 
Protein coding
F6U8U1 TSL:5CDS 5' and 3' incomplete
ENSMUST00000143023.2Itsn1-221821256aaENSMUSP00000119654.2
 
Protein coding
F6R6C8 TSL:1CDS 5' incomplete
ENSMUST00000231535.2Itsn1-227767131aaENSMUSP00000156037.2
 
Protein coding
A0A338P6L8 CDS 3' incomplete
ENSMUST00000231974.2Itsn1-230728187aaENSMUSP00000155993.2
 
Protein coding
A0A338P6K7 CDS 3' incomplete
ENSMUST00000141625.2Itsn1-220519173aaENSMUSP00000115563.2
 
Protein coding
F6TCC6 TSL:5CDS 5' and 3' incomplete
ENSMUST00000525222.1Itsn1-264598064aaENSMUSP00000303585.1
 
Nonsense mediated decay
--
ENSMUST00000525194.1Itsn1-23657811013aaENSMUSP00000303557.1
 
Nonsense mediated decay
--
ENSMUST00000525200.1Itsn1-242577573aaENSMUSP00000303563.1
 
Nonsense mediated decay
--
ENSMUST00000525196.1Itsn1-2385748748aaENSMUSP00000303559.1
 
Nonsense mediated decay
--
ENSMUST00000525198.1Itsn1-240572664aaENSMUSP00000303561.1
 
Nonsense mediated decay
--
ENSMUST00000525192.1Itsn1-23456961351aaENSMUSP00000303555.1
 
Nonsense mediated decay
--
ENSMUST00000525202.1Itsn1-244554873aaENSMUSP00000303565.1
 
Nonsense mediated decay
--
ENSMUST00000525205.1Itsn1-247545964aaENSMUSP00000303568.1
 
Nonsense mediated decay
--
ENSMUST00000559165.1Itsn1-27854021008aaENSMUSP00000337528.1
 
Nonsense mediated decay
--
ENSMUST00000525216.1Itsn1-2585384748aaENSMUSP00000303579.1
 
Nonsense mediated decay
--
ENSMUST00000525215.1Itsn1-257538164aaENSMUSP00000303578.1
 
Nonsense mediated decay
--
ENSMUST00000525206.1Itsn1-2485353960aaENSMUSP00000303569.1
 
Nonsense mediated decay
--
ENSMUST00000525221.1Itsn1-263531264aaENSMUSP00000303584.1
 
Nonsense mediated decay
--
ENSMUST00000525195.1Itsn1-2375309133aaENSMUSP00000303558.1
 
Nonsense mediated decay
--
ENSMUST00000525208.1Itsn1-2505276671aaENSMUSP00000303571.1
 
Nonsense mediated decay
--
ENSMUST00000525213.1Itsn1-255519964aaENSMUSP00000303576.1
 
Nonsense mediated decay
--
ENSMUST00000525209.1Itsn1-2515164960aaENSMUSP00000303572.1
 
Nonsense mediated decay
--
ENSMUST00000525234.1Itsn1-276371364aaENSMUSP00000303597.1
 
Nonsense mediated decay
--
ENSMUST00000525229.1Itsn1-271359373aaENSMUSP00000303592.1
 
Nonsense mediated decay
--
ENSMUST00000559167.1Itsn1-2803486748aaENSMUSP00000337530.1
 
Nonsense mediated decay
--
ENSMUST00000525225.1Itsn1-267330864aaENSMUSP00000303588.1
 
Nonsense mediated decay
--
ENSMUST00000137575.2Itsn1-216105516aaENSMUSP00000156103.2
 
Nonsense mediated decay
Q6J1F0 TSL:1CDS 5' incomplete
ENSMUST00000153741.2Itsn1-22499177aaENSMUSP00000117320.2
 
Nonsense mediated decay
Q6J1S9 TSL:1CDS 5' incomplete
ENSMUST00000126374.3Itsn1-21179373aaENSMUSP00000114718.2
 
Nonsense mediated decay
F6ZLP6 TSL:1CDS 5' incomplete
ENSMUST00000131739.2Itsn1-21242266aaENSMUSP00000114145.2
 
Nonsense mediated decay
F6ZX53 TSL:1CDS 5' incomplete
ENSMUST00000232198.2Itsn1-2311167No protein-
 
Protein coding CDS not defined
--
ENSMUST00000151044.2Itsn1-223723No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000141073.2Itsn1-219568No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000133389.2Itsn1-214481No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000124094.8Itsn1-209442No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000138117.2Itsn1-2172818No protein-
 
Retained intron
-TSL:1
ENSMUST00000154967.2Itsn1-225777No protein-
 
Retained intron
-TSL:3
ENSMUST00000144101.2Itsn1-222492No protein-
 
Retained intron
-TSL:1
ENSMUST00000131983.8Itsn1-213488No protein-
 
Retained intron
-TSL:2
ENSMUST00000156841.2Itsn1-226355No protein-
 
Retained intron
-TSL:5
ENSMUST00000139890.2Itsn1-218352No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 29, Coding exons: 28, Transcript length: 5,454 bps, Translation length: 1,213 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Z0R4

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49913

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000056482.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.