Transcript: ENSMUST00000054920.5 Myorg-201

Description

myogenesis regulating glycosidase (putative) [Source:MGI Symbol;Acc:MGI:2140300]

Gene Synonyms

AI464131, NET37

Location

Chromosome 4: 41,495,604-41,503,076 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 12 domains and features, is associated with 901 variant alleles and maps to 198 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000046312.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000054920.5	Myorg-201	4173	716aa	ENSMUSP00000059038.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38716	Q69ZQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000149596.2	Myorg-202	725	45aa	ENSMUSP00000122357.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2ANN7	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 4,173 bps, Translation length: 716 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q69ZQ1

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38716

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000054920.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000054920.5 Myorg-201

Summary

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Transcript: ENSMUST00000054920.5 Myorg-201

Summary

About Us

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