Transcript: ENSMUST00000051400.8 Cyp4x1-201

Description

cytochrome P450, family 4, subfamily x, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1932403]

Gene Synonyms

Cyp4a28-ps

Location

Chromosome 4: 114,965,879-114,991,174 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 19 domains and features, is associated with 2015 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000047155.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000051400.8	Cyp4x1-201	1524	507aa	ENSMUSP00000059545.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS18488	Q6A152	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000106545.8	Cyp4x1-202	4187	481aa	ENSMUSP00000102155.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A9Y7	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,524 bps, Translation length: 507 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6A152

CCDS

This transcript is a member of the Mouse CCDS set: CCDS18488

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000051400.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000051400.8 Cyp4x1-201

Summary

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Transcript: ENSMUST00000051400.8 Cyp4x1-201

Summary

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