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Mouse (GRCm39)
Description

chromodomain helicase DNA binding protein 9 [Source:MGI Symbol;Acc:MGI:1924001]

Gene Synonyms

1810014J18Rik, 9030205D12Rik, A330063D19Rik, AD013

Location
About this transcript

This transcript has 40 exons, is annotated with 78 domains and features, is associated with 12790 variant alleles and maps to 411 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000109614.9Chd9-202115652885aaENSMUSP00000105243.3
 
Protein coding
CCDS80912Q8BYH8-1 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS ALT2TSL:5
ENSMUST00000048665.8Chd9-201120082869aaENSMUSP00000046356.7
 
Protein coding
CCDS22517Q8BYH8-2 GENCODE BasicAPPRIS P2TSL:1
ENSMUST00000209423.2Chd9-20594192885aaENSMUSP00000148088.2
 
Protein coding
CCDS80912Q8BYH8-1 GENCODE BasicAPPRIS ALT2TSL:1
ENSMUST00000210947.2Chd9-2102964874aaENSMUSP00000147741.2
 
Protein coding
A0A1B0GS03 TSL:1CDS 3' incomplete
ENSMUST00000211403.2Chd9-2132279641aaENSMUSP00000147839.2
 
Protein coding
A0A1B0GS89 TSL:1CDS 3' incomplete
ENSMUST00000209746.2Chd9-20825959aaENSMUSP00000147296.2
 
Protein coding
A0A1B0GQX8 TSL:5CDS 3' incomplete
ENSMUST00000209203.2Chd9-20392131853aaENSMUSP00000147407.2
 
Nonsense mediated decay
A0A1B0GR76 TSL:1
ENSMUST00000211034.2Chd9-211799No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000209474.2Chd9-206759No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000211215.2Chd9-212728No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000211795.2Chd9-215407No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000210887.2Chd9-2094323No protein-
 
Retained intron
-TSL:NA
ENSMUST00000211552.2Chd9-2143285No protein-
 
Retained intron
-TSL:NA
ENSMUST00000209341.2Chd9-2042632No protein-
 
Retained intron
-TSL:1
ENSMUST00000209531.2Chd9-207607No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 40, Coding exons: 38, Transcript length: 12,008 bps, Translation length: 2,869 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BYH8

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22517

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000048665.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.