Mouse (GRCm39)
Description

LIM homeobox protein 9 [Source:MGI Symbol;Acc:MGI:1316721]

Gene Synonyms

3110009O07Rik, LH2B, Lhx9 alpha

About this transcript

This transcript has 7 exons, is annotated with 26 domains and features, is associated with 1402 variant alleles and maps to 284 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000112026.4Lhx9-2042065397aaENSMUSP00000107657.3
 
Protein coding
CCDS35726Q9WUH2 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000019374.14Lhx9-2014937330aaENSMUSP00000019374.8
 
Protein coding
CCDS15334Q9WUH2-4 GENCODE basicTSL:1
ENSMUST00000112030.9Lhx9-2054633321aaENSMUSP00000107661.3
 
Protein coding
CCDS15333Q9WUH2-2 GENCODE basicTSL:5
ENSMUST00000093486.10Lhx9-2034551321aaENSMUSP00000091198.4
 
Protein coding
CCDS15333Q9WUH2-2 GENCODE basicTSL:1
ENSMUST00000046870.13Lhx9-2023645388aaENSMUSP00000036480.7
 
Protein coding
Q9WUH2-1 GENCODE basicTSL:5
ENSMUST00000194557.2Lhx9-207105875aaENSMUSP00000142268.2
 
Nonsense mediated decay
A0A0A6YY42 TSL:5
ENSMUST00000192425.2Lhx9-2061946No protein-
 
Retained intron
-TSL:NA
Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,645 bps, Translation length: 388 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9WUH2

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000046870.13

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.