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Mouse (GRCm39)
Description

cardiotrophin-like cytokine factor 1 [Source:MGI Symbol;Acc:MGI:1930088]

Gene Synonyms

Bsf3, CLC, NNT-1/BSF-3

Location
About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 758 variant alleles and maps to 217 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000046506.7Clcf1-2011847225aaENSMUSP00000045562.7
 
Protein coding
CCDS29423Q9QZM3 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENSMUST00000235355.2Clcf1-20538040aaENSMUSP00000157886.2
 
Protein coding
A0A494BA42 CDS 3' incomplete
ENSMUST00000138090.2Clcf1-204187844aaENSMUSP00000118157.2
 
Nonsense mediated decay
D6RIL9 TSL:1
ENSMUST00000126457.2Clcf1-202646No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000132305.2Clcf1-2033550No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,847 bps, Translation length: 225 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9QZM3

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29423

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000046506.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.