Transcript: ENSMUST00000045477.6 Stk32a-201

Description

serine/threonine kinase 32A [Source:MGI Symbol;Acc:MGI:2442403]

Gene Synonyms

A930015B13Rik, YANK1

Location

Chromosome 18: 43,340,648-43,451,747 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 15 domains and features, is associated with 6511 variant alleles and maps to 186 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000039954.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000045477.6	Stk32a-201	5080	398aa	ENSMUSP00000038471.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29218	Q8BGW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000237797.2	Stk32a-204	4896	368aa	ENSMUSP00000158482.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8BGW6-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000236899.2	Stk32a-203	350	108aa	ENSMUSP00000158223.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BAT5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000235682.2	Stk32a-202	3277	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 5,080 bps, Translation length: 398 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BGW6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29218

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000045477.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000045477.6 Stk32a-201

Summary

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Transcript: ENSMUST00000045477.6 Stk32a-201

Summary

About Us

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