Transcript: ENSMUST00000040616.9 Kctd7-201

Description

potassium channel tetramerisation domain containing 7 [Source:MGI Symbol;Acc:MGI:2442265]

Gene Synonyms

9430010P06Rik

Location

Chromosome 5: 130,173,702-130,184,647 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 1078 variant alleles and maps to 161 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000034110.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000040616.9	Kctd7-201	4291	289aa	ENSMUSP00000044568.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19707	Q8BJK1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000144467.2	Kctd7-202	696	232aa	ENSMUSP00000121490.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6QXA3	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSMUST00000144878.3	Kctd7-203	612	49aa	ENSMUSP00000143940.2	Nonsense mediated decay		A0A0J9YU06	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,291 bps, Translation length: 289 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BJK1

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19707

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000040616.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000040616.9 Kctd7-201

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Transcript: ENSMUST00000040616.9 Kctd7-201

Summary

About Us

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