Transcript: ENSMUST00000039088.9 Tex19.1-201

Description

testis expressed gene 19.1 [Source:MGI Symbol;Acc:MGI:1920929]

Gene Synonyms

2410081M02Rik, Tex19, Tex19.1

Location

Chromosome 11: 121,036,969-121,039,145 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 526 variant alleles and maps to 153 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000039329.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000039088.9	Tex19.1-201	1745	351aa	ENSMUSP00000048592.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25768	Q99MV2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000155694.2	Tex19.1-202	406	16aa	ENSMUSP00000114548.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZCA2	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 1,745 bps, Translation length: 351 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99MV2

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25768

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000039088.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000039088.9 Tex19.1-201

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Transcript: ENSMUST00000039088.9 Tex19.1-201

Summary

About Us

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