Transcript: ENSMUST00000038856.14 Trhr-201

Description

thyrotropin releasing hormone receptor [Source:MGI Symbol;Acc:MGI:98824]

Gene Synonyms

TRH-R1

Location

Chromosome 15: 44,059,531-44,098,940 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 43 domains and features, is associated with 2511 variant alleles and maps to 219 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000038760.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000038856.14	Trhr-201	3608	393aa	ENSMUSP00000036320.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37068	P21761 Q32MS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000110289.4	Trhr-202	1745	393aa	ENSMUSP00000105918.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37068	P21761 Q32MS1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000226626.2	Trhr-203	3494	393aa	ENSMUSP00000154650.2	Nonsense mediated decay	CCDS37068	P21761 Q32MS1	-
ENSMUST00000227505.2	Trhr-204	468	83aa	ENSMUSP00000154140.2	Nonsense mediated decay		A0A2I3BQM9	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 3,608 bps, Translation length: 393 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21761

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37068

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000038856.14

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000038856.14 Trhr-201

Summary

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Transcript: ENSMUST00000038856.14 Trhr-201

Summary

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