Mouse (GRCm39)
Description

phagosome assembly factor 1 [Source:MGI Symbol;Acc:MGI:2443049]

Gene Synonyms

D230025D16Rik, Lin10

About this transcript

This transcript has 16 exons, is annotated with 4 domains and features, is associated with 1749 variant alleles and maps to 294 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000034361.10Phaf1-2012916422aaENSMUSP00000034361.4
 
Protein coding
CCDS22593Q922R1 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000132964.2Phaf1-203513117aaENSMUSP00000123583.2
 
Protein coding
D3YYD8 TSL:3CDS 3' incomplete
ENSMUST00000141957.8Phaf1-2052460165aaENSMUSP00000119148.2
 
Nonsense mediated decay
D6RCI5 TSL:1
ENSMUST00000124113.8Phaf1-2022364121aaENSMUSP00000119743.2
 
Nonsense mediated decay
D6RI91 TSL:2
ENSMUST00000156561.8Phaf1-2062937No protein-
 
Retained intron
-TSL:2
ENSMUST00000133035.2Phaf1-204707No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,916 bps, Translation length: 422 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q922R1

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22593

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000034361.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.