Transcript: ENSMUST00000032800.10 Tyrobp-201

Description

TYRO protein tyrosine kinase binding protein [Source:MGI Symbol;Acc:MGI:1277211]

Gene Synonyms

DAP12, KARAP, killer cell activating receptor associated protein

Location

Chromosome 7: 30,113,213-30,117,002 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 815 variant alleles and maps to 146 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000030579.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000032800.10	Tyrobp-201	564	114aa	ENSMUSP00000032800.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21089	O54885 Q3U419	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000207982.2	Tyrobp-202	597	141aa	ENSMUSP00000146494.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A140LHP7	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000208125.2	Tyrobp-203	575	92aa	ENSMUSP00000146653.2	Nonsense mediated decay		A0A140LI31	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 564 bps, Translation length: 114 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O54885

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21089

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000032800.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENSMUST00000032800.10 Tyrobp-201

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Transcript: ENSMUST00000032800.10 Tyrobp-201

Summary

About Us

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