Mouse (GRCm39)
Description

chloride channel, voltage-sensitive 1 [Source:MGI Symbol;Acc:MGI:88417]

Gene Synonyms

Clc-1, Clc1, NMF355, SMCC1

Location
About this transcript

This transcript has 23 exons, is annotated with 46 domains and features, is associated with 1475 variant alleles and maps to 197 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000031894.13Clcn1-2013545994aaENSMUSP00000031894.7
 
Protein coding
CCDS39471Q64347 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000163936.8Clcn1-2042770923aaENSMUSP00000130148.2
 
Protein coding
F6QI82 TSL:5CDS 5' incomplete
ENSMUST00000238845.2Clcn1-2111061326aaENSMUSP00000158998.2
 
Protein coding
A0A5F8MPY7 CDS 3' incomplete
ENSMUST00000169024.8Clcn1-2083029262aaENSMUSP00000130968.2
 
Nonsense mediated decay
F7C9S1 TSL:5CDS 5' incomplete
ENSMUST00000165780.8Clcn1-2062899229aaENSMUSP00000130550.2
 
Nonsense mediated decay
F6QL23 TSL:5CDS 5' incomplete
ENSMUST00000164091.8Clcn1-2052838258aaENSMUSP00000131354.2
 
Nonsense mediated decay
E9Q2N3 TSL:5
ENSMUST00000170028.8Clcn1-2102817289aaENSMUSP00000132154.2
 
Nonsense mediated decay
F6X177 TSL:5CDS 5' incomplete
ENSMUST00000168660.4Clcn1-2072744257aaENSMUSP00000126045.2
 
Nonsense mediated decay
F7A9J6 TSL:2CDS 5' incomplete
ENSMUST00000163235.2Clcn1-203417104aaENSMUSP00000132387.2
 
Nonsense mediated decay
F6VSA8 TSL:5CDS 5' incomplete
ENSMUST00000114684.8Clcn1-2023504No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000169902.2Clcn1-209774No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,545 bps, Translation length: 994 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q64347

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39471

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000031894.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.