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Mouse (GRCm39)
Description

syndecan binding protein [Source:MGI Symbol;Acc:MGI:1337026]

Gene Synonyms

MDA-9, Sycl, syndecan interacting protein, syntenin, syntenin-1

Location
About this transcript

This transcript has 9 exons, is annotated with 18 domains and features, is associated with 2360 variant alleles and maps to 274 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000029912.11Sdcbp-2012745299aaENSMUSP00000029912.5
 
Protein coding
CCDS51110O08992 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS ALT1TSL:1
ENSMUST00000103008.12Sdcbp-2022086298aaENSMUSP00000100073.6
 
Protein coding
CCDS17951Q3TMX0 GENCODE BasicAPPRIS P4TSL:1
ENSMUST00000108374.8Sdcbp-2041803199aaENSMUSP00000104011.2
 
Protein coding
A2AKJ9 GENCODE BasicTSL:1
ENSMUST00000175769.8Sdcbp-208975249aaENSMUSP00000135777.2
 
Protein coding
H3BLG5 TSL:5CDS 3' incomplete
ENSMUST00000153861.2Sdcbp-206697209aaENSMUSP00000119838.2
 
Protein coding
A2AKJ6 TSL:5CDS 3' incomplete
ENSMUST00000140830.8Sdcbp-20550691aaENSMUSP00000122411.2
 
Protein coding
A2AKJ5 TSL:5CDS 3' incomplete
ENSMUST00000155247.2Sdcbp-2072603No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000108371.4Sdcbp-203369No protein-
 
Protein coding CDS not defined
-TSL:5
Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,745 bps, Translation length: 299 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O08992

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51110

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000029912.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.