Mouse (GRCm39)
Description

jade family PHD finger 1 [Source:MGI Symbol;Acc:MGI:1925835]

Gene Synonyms

D530048A03Rik, Phf17

Location
About this transcript

This transcript has 11 exons, is annotated with 29 domains and features, is associated with 3224 variant alleles and maps to 378 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000163764.8Jade1-2025584834aaENSMUSP00000128152.2
 
Protein coding
CCDS17331Q6ZPI0 Ensembl CanonicalGENCODE basicTSL:1
ENSMUST00000026865.15Jade1-2015481834aaENSMUSP00000026865.9
 
Protein coding
CCDS17331Q6ZPI0 GENCODE basicTSL:1
ENSMUST00000168086.7Jade1-2034790834aaENSMUSP00000131441.2
 
Protein coding
CCDS17331Q6ZPI0 GENCODE basicTSL:1
ENSMUST00000191952.2Jade1-2063327510aaENSMUSP00000141499.2
 
Protein coding
Q6ZPI0-2 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000170711.8Jade1-2042896834aaENSMUSP00000127113.2
 
Protein coding
CCDS17331Q6ZPI0 GENCODE basicTSL:5
ENSMUST00000195846.6Jade1-214543152aaENSMUSP00000141711.2
 
Protein coding
A0A0A6YWV0 TSL:5CDS 3' incomplete
ENSMUST00000194181.6Jade1-210542104aaENSMUSP00000141670.2
 
Protein coding
A0A0A6YWS2 TSL:5CDS 3' incomplete
ENSMUST00000192451.2Jade1-208491164aaENSMUSP00000142142.2
 
Protein coding
A0A0A6YXU2 TSL:3CDS 5' and 3' incomplete
ENSMUST00000192300.2Jade1-207449No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000193080.6Jade1-209434No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000194348.2Jade1-211382No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000191921.2Jade1-205774No protein-
 
Retained intron
-TSL:2
ENSMUST00000195322.6Jade1-213718No protein-
 
Retained intron
-TSL:2
ENSMUST00000195200.2Jade1-212487No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 11, Coding exons: 10, Transcript length: 5,481 bps, Translation length: 834 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZPI0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17331

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000026865.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.