Transcript: ENSMUST00000026122.11 P4hb-201

Description

prolyl 4-hydroxylase, beta polypeptide [Source:MGI Symbol;Acc:MGI:97464]

Gene Synonyms

ERp59, PDI, Pdia1, Thbp, protein disulfide isomerase

Location

Chromosome 11: 120,451,124-120,464,079 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 31 domains and features, is associated with 1094 variant alleles and maps to 264 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000025130.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000026122.11	P4hb-201	2861	509aa	ENSMUSP00000026122.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25742	P09103	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000168360.2	P4hb-203	770	165aa	ENSMUSP00000128796.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9Q8G8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000166620.2	P4hb-202	414	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,861 bps, Translation length: 509 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09103

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25742

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000026122.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000026122.11 P4hb-201

Summary

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Transcript: ENSMUST00000026122.11 P4hb-201

Summary

About Us

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