Mouse (GRCm39)
Description

survival motor neuron domain containing 1 [Source:MGI Symbol;Acc:MGI:1923729]

Gene Synonyms

2410004J23Rik, 4933440I19Rik

Location
About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 970 variant alleles and maps to 263 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000025997.7Smndc1-2011948238aaENSMUSP00000025997.6
 
Protein coding
CCDS29902Q8BGT7 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000237529.2Smndc1-2051480238aaENSMUSP00000157540.2
 
Protein coding
CCDS29902Q8BGT7 GENCODE basicAPPRIS P1
ENSMUST00000236245.2Smndc1-20339383aaENSMUSP00000158182.2
 
Protein coding
A0A494BAP9 CDS 3' incomplete
ENSMUST00000235830.2Smndc1-2021992145aaENSMUSP00000158001.2
 
Nonsense mediated decay
A0A494BAA2 -
ENSMUST00000236962.2Smndc1-2041478102aaENSMUSP00000157887.2
 
Nonsense mediated decay
A0A494BA53 -
Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,948 bps, Translation length: 238 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BGT7

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29902

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000025997.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.