Mouse (GRCm39)
Description

Shoc2, leucine rich repeat scaffold protein [Source:MGI Symbol;Acc:MGI:1927197]

Gene Synonyms

Sur-8, soc-2 (suppressor of clear) homolog (C. elegans)

Location
About this transcript

This transcript has 9 exons, is annotated with 60 domains and features, is associated with 3901 variant alleles and maps to 272 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000025932.9Shoc2-2013965582aaENSMUSP00000025932.8
 
Protein coding
CCDS29904O88520 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000169861.9Shoc2-2023664582aaENSMUSP00000127932.2
 
Protein coding
CCDS29904O88520 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000237908.2Shoc2-2072976372aaENSMUSP00000158077.2
 
Protein coding
A0A494BAG1 CDS 5' incomplete
ENSMUST00000237801.2Shoc2-20663230aaENSMUSP00000157994.2
 
Nonsense mediated decay
A0A494BAE5 CDS 5' incomplete
ENSMUST00000236144.2Shoc2-2041456No protein-
 
Protein coding CDS not defined
--
ENSMUST00000235945.2Shoc2-203752No protein-
 
Protein coding CDS not defined
--
ENSMUST00000237296.2Shoc2-205443No protein-
 
Protein coding CDS not defined
--
Statistics

Exons: 9, Coding exons: 8, Transcript length: 3,965 bps, Translation length: 582 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O88520

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29904

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000025932.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.