Transcript: ENSMUST00000025349.12 Myot-201

Description

myotilin [Source:MGI Symbol;Acc:MGI:1889800]

Gene Synonyms

5530402I04Rik, Ttid

Location

Chromosome 18: 44,467,141-44,488,791 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 19 domains and features, is associated with 1696 variant alleles and maps to 178 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024471.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000025349.12	Myot-201	2209	496aa	ENSMUSP00000025349.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29228	A0A509 Q9JIF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000115498.2	Myot-202	2087	496aa	ENSMUSP00000111160.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29228	A0A509 Q9JIF9	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,209 bps, Translation length: 496 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JIF9

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29228

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000025349.12

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000025349.12 Myot-201

Summary

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Transcript: ENSMUST00000025349.12 Myot-201

Summary

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