Transcript: ENSMUST00000025075.4 Bambi-201

Description

BMP and activin membrane-bound inhibitor [Source:MGI Symbol;Acc:MGI:1915260]

Gene Synonyms

2610003H06Rik

Location

Chromosome 18: 3,507,871-3,516,404 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 15 domains and features, is associated with 698 variant alleles and maps to 147 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024232.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000025075.4	Bambi-201	5126	260aa	ENSMUSP00000025075.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29034	Q9D0L6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000565803.1	Bambi-202	5123	259aa	ENSMUSP00000344166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 5,126 bps, Translation length: 260 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D0L6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29034

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000025075.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

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Transcript: ENSMUST00000025075.4 Bambi-201

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Transcript: ENSMUST00000025075.4 Bambi-201

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