Transcript: ENSMUST00000024705.6 Slc25a27-201

Description

solute carrier family 25, member 27 [Source:MGI Symbol;Acc:MGI:1921261]

Gene Synonyms

3632410G24Rik, 9430092A03Rik, D530043E16Rik, Ucp4

Location

Chromosome 17: 43,952,782-43,978,105 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 2183 variant alleles and maps to 242 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000023912.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000024705.6	Slc25a27-201	2895	322aa	ENSMUSP00000024705.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28798	Q9D6D0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000463671.1	Slc25a27-214	2717	325aa	ENSMUSP00000242034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000463676.1	Slc25a27-219	2714	338aa	ENSMUSP00000242039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000463674.1	Slc25a27-217	2694	258aa	ENSMUSP00000242037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000463682.1	Slc25a27-225	2605	302aa	ENSMUSP00000242045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000233442.2	Slc25a27-202	1273	81aa	ENSMUSP00000156649.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2WCR9	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000582335.1	Slc25a27-235	640	62aa	ENSMUSP00000360700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000463689.1	Slc25a27-232	5663	62aa	ENSMUSP00000242052.1	Nonsense mediated decay		-	-
ENSMUST00000463661.1	Slc25a27-204	4216	62aa	ENSMUSP00000242024.1	Nonsense mediated decay		-	-
ENSMUST00000463660.1	Slc25a27-203	4214	128aa	ENSMUSP00000242023.1	Nonsense mediated decay		-	-
ENSMUST00000463663.1	Slc25a27-206	4192	81aa	ENSMUSP00000242026.1	Nonsense mediated decay		-	-
ENSMUST00000463664.1	Slc25a27-207	4188	62aa	ENSMUSP00000242027.1	Nonsense mediated decay		-	-
ENSMUST00000463662.1	Slc25a27-205	4063	62aa	ENSMUSP00000242025.1	Nonsense mediated decay		-	-
ENSMUST00000463665.1	Slc25a27-208	4051	56aa	ENSMUSP00000242028.1	Nonsense mediated decay		-	-
ENSMUST00000463685.1	Slc25a27-228	3962	62aa	ENSMUSP00000242048.1	Nonsense mediated decay		-	-
ENSMUST00000463675.1	Slc25a27-218	3941	81aa	ENSMUSP00000242038.1	Nonsense mediated decay		-	-
ENSMUST00000567677.1	Slc25a27-234	3863	56aa	ENSMUSP00000346040.1	Nonsense mediated decay		-	-
ENSMUST00000463686.1	Slc25a27-229	3540	56aa	ENSMUSP00000242049.1	Nonsense mediated decay		-	-
ENSMUST00000463666.1	Slc25a27-209	3361	133aa	ENSMUSP00000242029.1	Nonsense mediated decay		-	-
ENSMUST00000463688.1	Slc25a27-231	3144	133aa	ENSMUSP00000242051.1	Nonsense mediated decay		-	-
ENSMUST00000463669.1	Slc25a27-212	3095	81aa	ENSMUSP00000242032.1	Nonsense mediated decay		-	-
ENSMUST00000463672.1	Slc25a27-215	3051	126aa	ENSMUSP00000242035.1	Nonsense mediated decay		-	-
ENSMUST00000463684.1	Slc25a27-227	3050	81aa	ENSMUSP00000242047.1	Nonsense mediated decay		-	-
ENSMUST00000567676.1	Slc25a27-233	3044	173aa	ENSMUSP00000346039.1	Nonsense mediated decay		-	-
ENSMUST00000463681.1	Slc25a27-224	2996	242aa	ENSMUSP00000242044.1	Nonsense mediated decay		-	-
ENSMUST00000463677.1	Slc25a27-220	2902	62aa	ENSMUSP00000242040.1	Nonsense mediated decay		-	-
ENSMUST00000463670.1	Slc25a27-213	2868	132aa	ENSMUSP00000242033.1	Nonsense mediated decay		-	-
ENSMUST00000463673.1	Slc25a27-216	2827	42aa	ENSMUSP00000242036.1	Nonsense mediated decay		-	-
ENSMUST00000463668.1	Slc25a27-211	2808	128aa	ENSMUSP00000242031.1	Nonsense mediated decay		-	-
ENSMUST00000463667.1	Slc25a27-210	2777	50aa	ENSMUSP00000242030.1	Nonsense mediated decay		-	-
ENSMUST00000463687.1	Slc25a27-230	2675	132aa	ENSMUSP00000242050.1	Nonsense mediated decay		-	-
ENSMUST00000463683.1	Slc25a27-226	2581	50aa	ENSMUSP00000242046.1	Nonsense mediated decay		-	-
ENSMUST00000463679.1	Slc25a27-222	2538	81aa	ENSMUSP00000242042.1	Nonsense mediated decay		-	-
ENSMUST00000463680.1	Slc25a27-223	2400	62aa	ENSMUSP00000242043.1	Nonsense mediated decay		-	-
ENSMUST00000463678.1	Slc25a27-221	2215	50aa	ENSMUSP00000242041.1	Nonsense mediated decay		-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,895 bps, Translation length: 322 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D6D0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28798

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000024705.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Upcoming Ensembl Platform Transition

Transcript: ENSMUST00000024705.6 Slc25a27-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSMUST00000024705.6 Slc25a27-201

Summary

About Us

Get help

Our sister sites

Follow us