Transcript: ENSMUST00000022656.8 Bora-201

Description

bora, aurora kinase A activator [Source:MGI Symbol;Acc:MGI:1924994]

Gene Synonyms

6720463M24Rik

Location

Chromosome 14: 99,283,813-99,311,976 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 15 domains and features, is associated with 2371 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022070.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022656.8	Bora-201	2726	525aa	ENSMUSP00000022656.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27309	Q8BS90	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000227744.2	Bora-204	3834	273aa	ENSMUSP00000154660.2	Nonsense mediated decay		Q8BS90-2	-
ENSMUST00000227128.2	Bora-203	704	115aa	ENSMUSP00000154817.2	Nonsense mediated decay		A0A2I3BS24	-
ENSMUST00000226823.2	Bora-202	1071	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000228082.2	Bora-205	881	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,726 bps, Translation length: 525 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BS90

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27309

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000022656.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000022656.8 Bora-201

Summary

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Transcript: ENSMUST00000022656.8 Bora-201

Summary

About Us

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