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Mouse (GRCm39)
Description

lysophosphatidylcholine acyltransferase 1 [Source:MGI Symbol;Acc:MGI:2384812]

Gene Synonyms

2900035H07Rik, Aytl2, LPCAT, rd11

Location
About this transcript

This transcript has 14 exons, is annotated with 23 domains and features, is associated with 2915 variant alleles and maps to 373 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000022099.15Lpcat1-2013675534aaENSMUSP00000022099.9
 
Protein coding
CCDS36726Q3TFD2-1 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P4TSL:1
ENSMUST00000223060.2Lpcat1-2082141486aaENSMUSP00000152190.2
 
Protein coding
Q3TFD2-2 GENCODE BasicAPPRIS ALT1TSL:1
ENSMUST00000123766.8Lpcat1-202353277aaENSMUSP00000117965.2
 
Nonsense mediated decay
D6RE48 TSL:5
ENSMUST00000147566.8Lpcat1-206197346aaENSMUSP00000117238.2
 
Nonsense mediated decay
D6RFA8 TSL:1
ENSMUST00000133791.2Lpcat1-204789No protein-
 
Retained intron
-TSL:5
ENSMUST00000140431.2Lpcat1-205719No protein-
 
Retained intron
-TSL:2
ENSMUST00000222881.2Lpcat1-207691No protein-
 
Retained intron
-TSL:2
ENSMUST00000124627.2Lpcat1-203360No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,675 bps, Translation length: 534 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3TFD2

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36726

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000022099.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.