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Mouse (GRCm39)
Description

synaptophysin like 1 [Source:MGI Symbol;Acc:MGI:108081]

Gene Synonyms

D12Ertd446e, Pan I, Pphn, Sypl

Location
About this transcript

This transcript has 5 exons, is annotated with 23 domains and features, is associated with 1389 variant alleles and maps to 359 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000076698.13Sypl1-2024999261aaENSMUSP00000075990.6
 
Protein coding
CCDS25872O09117-1 Ensembl CanonicalGENCODE PrimaryGENCODE BasicTSL:1
ENSMUST00000020885.13Sypl1-2012019243aaENSMUSP00000020885.7
 
Protein coding
CCDS25873O09117-2 GENCODE BasicAPPRIS P1TSL:1
ENSMUST00000122861.8Sypl1-20364679aaENSMUSP00000122695.2
 
Nonsense mediated decay
D6RFU9 TSL:3
ENSMUST00000129592.2Sypl1-204696No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000139339.2Sypl1-206569No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000218816.2Sypl1-207529No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000131562.2Sypl1-2052982No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,019 bps, Translation length: 243 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O09117

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25873

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000020885.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.