Transcript: ENSMUST00000018632.11 Myh4-201

Description

myosin, heavy polypeptide 4, skeletal muscle [Source:MGI Symbol;Acc:MGI:1339713]

Gene Synonyms

MHC2B, MM, MYH-2B, Minimsc, Minmus, MyHC-IIb, Myhsf

Location

Chromosome 11: 67,128,855-67,151,272 forward strand.

About this transcript

This transcript has 39 exons, is annotated with 67 domains and features, is associated with 1787 variant alleles and maps to 578 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000057003.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000018632.11	Myh4-201	6016	1939aa	ENSMUSP00000018632.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24856	Q5SX39	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000170942.2	Myh4-202	5912	1939aa	ENSMUSP00000127514.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24856	Q5SX39	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 39, Coding exons: 38, Transcript length: 6,016 bps, Translation length: 1,939 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5SX39

CCDS

This transcript is a member of the Mouse CCDS set: CCDS24856

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000018632.11

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000018632.11 Myh4-201

Summary

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Transcript: ENSMUST00000018632.11 Myh4-201

Summary

About Us

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