Transcript: ENSMUST00000006027.7 Reep5-201

Description

receptor accessory protein 5 [Source:MGI Symbol;Acc:MGI:1270152]

Gene Synonyms

DP1/TB2, Dp1, TB2/DP1

Location

Chromosome 18: 34,477,938-34,506,422 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 2015 variant alleles and maps to 362 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000005873.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000006027.7	Reep5-201	2852	189aa	ENSMUSP00000006027.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50247	G3X8R0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000236887.2	Reep5-204	439	103aa	ENSMUSP00000158434.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BBE3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000235153.2	Reep5-202	406	119aa	ENSMUSP00000158509.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BBG4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000235227.2	Reep5-203	430	41aa	ENSMUSP00000158286.2	Nonsense mediated decay		A0A494BB24	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000237414.2	Reep5-205	399	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,852 bps, Translation length: 189 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50247

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000006027.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000006027.7 Reep5-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000006027.7 Reep5-201

Summary

About Us

Get help

Our sister sites

Follow us