Transcript: ENSMUST00000001921.3 Cpa3-201

Description

carboxypeptidase A3, mast cell [Source:MGI Symbol;Acc:MGI:88479]

Gene Synonyms

MC-CPA, mMC-CPA, mast cell carboxypeptidase A

Location

Chromosome 3: 20,269,784-20,296,345 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 1894 variant alleles and maps to 233 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000001865.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000001921.3	Cpa3-201	1449	417aa	ENSMUSP00000001921.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17262	P15089 Q542E3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000191659.2	Cpa3-202	398	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,449 bps, Translation length: 417 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P15089

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17262

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000001921.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000001921.3 Cpa3-201

Summary

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Transcript: ENSMUST00000001921.3 Cpa3-201

Summary

About Us

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