Transcript: ENSMUST00000000687.9 Haao-201

Description

3-hydroxyanthranilate 3,4-dioxygenase [Source:MGI Symbol;Acc:MGI:1349444]

Gene Synonyms

0610007K21Rik, 0610012J07Rik, 3-HAO, 3-HAOxase, 3HAO

Location

Chromosome 17: 84,138,585-84,154,178 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features, is associated with 1920 variant alleles and maps to 211 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000000673.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000000687.9	Haao-201	1381	286aa	ENSMUSP00000000687.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37709	Q78JT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234214.2	Haao-202	777	129aa	ENSMUSP00000157176.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EC06	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000234863.2	Haao-206	724	69aa	ENSMUSP00000157168.2	Nonsense mediated decay		A0A3Q4L2Y6	-
ENSMUST00000234312.2	Haao-203	329	64aa	ENSMUSP00000157081.2	Nonsense mediated decay		A0A3Q4EBW1	-
ENSMUST00000234823.2	Haao-205	3118	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000234750.2	Haao-204	538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,381 bps, Translation length: 286 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q78JT3

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37709

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000000687.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000000687.9 Haao-201

Summary

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Transcript: ENSMUST00000000687.9 Haao-201

Summary

About Us

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