Transcript: ENSMUST00000095793.3 Rnf17-201

Description

ring finger protein 17 [Source:MGI Symbol;Acc:MGI:1353419]

Gene Synonyms

MMIP-2

Location

Chromosome 14: 56,640,038-56,762,489 forward strand.

About this transcript

This transcript has 37 exons, is annotated with 46 domains and features, is associated with 5394 variant alleles and maps to 387 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000000365.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000095793.3	Rnf17-201	5264	1640aa	ENSMUSP00000093469.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27149	Q99MV7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000223627.2	Rnf17-202	2077	626aa	ENSMUSP00000153222.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q99MV7-4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000225737.2	Rnf17-206	680	80aa	ENSMUSP00000153573.2	Nonsense mediated decay		A0A286YDU5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000225621.2	Rnf17-205	2180	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000223646.2	Rnf17-203	621	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000225361.2	Rnf17-204	1609	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Transcript: ENSMUST00000095793.3 Rnf17-201

Protein summary

Protein domains for ENSMUSP00000093469.2

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Transcript: ENSMUST00000095793.3 Rnf17-201

Protein summary

Protein domains for ENSMUSP00000093469.2

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