Transcript: ENSMUST00000066807.8 Ercc6-201

Description

excision repair cross-complementing rodent repair deficiency, complementation group 6 [Source:MGI Symbol;Acc:MGI:1100494]

Gene Synonyms

C130058G22Rik, CS group B correcting gene, CSB

Location

Chromosome 14: 32,235,478-32,302,947 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 34 domains and features, is associated with 2831 variant alleles and maps to 302 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000054051.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000066807.8	Ercc6-201	8423	1481aa	ENSMUSP00000066256.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36868	F8VPZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000228549.2	Ercc6-206	2899	48aa	ENSMUSP00000154246.2	Nonsense mediated decay		A0A2I3BQP1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000226285.2	Ercc6-202	603	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000228035.2	Ercc6-205	473	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000228017.2	Ercc6-204	2991	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000227434.2	Ercc6-203	2705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Transcript: ENSMUST00000066807.8 Ercc6-201

Protein summary

Protein domains for ENSMUSP00000066256.7

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Transcript: ENSMUST00000066807.8 Ercc6-201

Protein summary

Protein domains for ENSMUSP00000066256.7

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