Transcript: ENSMUST00000056866.8 Pnpla1-201

Description

patatin-like phospholipase domain containing 1 [Source:MGI Symbol;Acc:MGI:3617850]

Location

Chromosome 17: 29,077,385-29,109,283 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 2407 variant alleles and maps to 160 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000043286.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000056866.8	Pnpla1-201	4484	599aa	ENSMUSP00000050123.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37533	B2KF06 Q3V1D5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000114737.8	Pnpla1-202	2170	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Transcript: ENSMUST00000056866.8 Pnpla1-201

Protein summary

Protein domains for ENSMUSP00000050123.6

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Transcript: ENSMUST00000056866.8 Pnpla1-201

Protein summary

Protein domains for ENSMUSP00000050123.6

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