Transcript: ENSMUST00000038495.6 Crp-201

Description

C-reactive protein, pentraxin-related [Source:MGI Symbol;Acc:MGI:88512]

Location

Chromosome 1: 172,525,614-172,527,540 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 22 domains and features, is associated with 601 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000037942.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000038495.6	Crp-201	1714	225aa	ENSMUSP00000044665.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35787	P14847	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000586399.1	Crp-204	1675	68aa	ENSMUSP00000364764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000586398.1	Crp-203	2411	51aa	ENSMUSP00000364763.1	Nonsense mediated decay		-	-
ENSMUST00000194251.2	Crp-202	1894	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

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Transcript: ENSMUST00000038495.6 Crp-201

Protein summary

Protein domains for ENSMUSP00000044665.4

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Transcript: ENSMUST00000038495.6 Crp-201

Protein summary

Protein domains for ENSMUSP00000044665.4

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