Transcript: ENSMUST00000031124.7 Slc10a4-ps-201

Description

solute carrier family 10 (sodium/bile acid cotransporter family), pseudogene [Source:MGI Symbol;Acc:MGI:3645333]

Gene Synonyms

Gm5868, Slc10a4l

Location

Chromosome 5: 72,738,982-72,744,893 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 1046 variant alleles and maps to 201 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000060204.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000031124.7	Slc10a4-ps-201	1380	145aa	ENSMUSP00000031124.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39110	Q8BJG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000239243.2	Slc10a4-ps-202	1382	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000239348.2	Slc10a4-ps-203	1292	No protein	-	Pseudogene that can contain introns since produced by gene duplication.Unprocessed pseudogene		-	-

Transcript: ENSMUST00000031124.7 Slc10a4-ps-201

Protein summary

Protein domains for ENSMUSP00000031124.5

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Transcript: ENSMUST00000031124.7 Slc10a4-ps-201

Protein summary

Protein domains for ENSMUSP00000031124.5

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