Transcript: ENSMUST00000024708.7 Tnfrsf21-201

Description

tumor necrosis factor receptor superfamily, member 21 [Source:MGI Symbol;Acc:MGI:2151075]

Gene Synonyms

DR6, Death receptor 6, TR7

Location

Chromosome 17: 43,327,413-43,400,080 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 46 domains and features, is associated with 5292 variant alleles and maps to 262 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000023915.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000024708.7	Tnfrsf21-201	3660	655aa	ENSMUSP00000024708.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28794	Q9EPU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000382417.1	Tnfrsf21-205	3656	592aa	ENSMUSP00000160780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000382421.1	Tnfrsf21-209	3651	591aa	ENSMUSP00000160784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000382416.1	Tnfrsf21-204	3862	519aa	ENSMUSP00000160779.1	Nonsense mediated decay		-	-
ENSMUST00000382419.1	Tnfrsf21-207	3624	52aa	ENSMUSP00000160782.1	Nonsense mediated decay		-	-
ENSMUST00000382418.1	Tnfrsf21-206	3599	296aa	ENSMUSP00000160781.1	Nonsense mediated decay		-	-
ENSMUST00000382420.1	Tnfrsf21-208	3369	429aa	ENSMUSP00000160783.1	Nonsense mediated decay		-	-
ENSMUST00000382415.1	Tnfrsf21-203	2577	36aa	ENSMUSP00000160778.1	Nonsense mediated decay		-	-
ENSMUST00000233482.2	Tnfrsf21-202	1659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Transcript: ENSMUST00000024708.7 Tnfrsf21-201

Protein summary

Protein domains for ENSMUSP00000024708.5

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Transcript: ENSMUST00000024708.7 Tnfrsf21-201

Protein summary

Protein domains for ENSMUSP00000024708.5

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