Transcript: ENSMUST00000022338.7 Rgr-201

Description

retinal G protein coupled receptor [Source:MGI Symbol;Acc:MGI:1929473]

Gene Synonyms

RGR opsin

Location

Chromosome 14: 36,756,866-36,770,921 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 38 domains and features, is associated with 1400 variant alleles and maps to 215 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000021804.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022338.7	Rgr-201	4240	291aa	ENSMUSP00000022338.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26949	Q543X1 Q9Z2B3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000225070.3	Rgr-203	4727	261aa	ENSMUSP00000153012.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCJ5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000532550.1	Rgr-207	4671	136aa	ENSMUSP00000310913.1	Nonsense mediated decay		-	-
ENSMUST00000225229.2	Rgr-204	648	89aa	ENSMUSP00000153565.2	Nonsense mediated decay		A0A286YDT4	-
ENSMUST00000225403.2	Rgr-205	633	112aa	ENSMUSP00000153006.2	Nonsense mediated decay		A0A286YCJ0	-
ENSMUST00000224506.2	Rgr-202	584	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000225634.2	Rgr-206	572	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Upcoming Ensembl Platform Transition

Transcript: ENSMUST00000022338.7 Rgr-201

Protein summary

Protein domains for ENSMUSP00000022338.6

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSMUST00000022338.7 Rgr-201

Protein summary

Protein domains for ENSMUSP00000022338.6

About Us

Get help

Our sister sites

Follow us