Transcript: ENSMUST00000021338.10 Ap4s1-201

Description

adaptor-related protein complex AP-4, sigma 1 [Source:MGI Symbol;Acc:MGI:1337065]

Location

Chromosome 12: 51,737,820-51,785,715 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 3345 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000020955.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000021338.10	Ap4s1-201	1035	144aa	ENSMUSP00000021338.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36441	Q9WVL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000218820.2	Ap4s1-202	757	134aa	ENSMUSP00000151472.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1W2P708	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Transcript: ENSMUST00000021338.10 Ap4s1-201

Protein summary

Protein domains for ENSMUSP00000021338.9

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Transcript: ENSMUST00000021338.10 Ap4s1-201

Protein summary

Protein domains for ENSMUSP00000021338.9

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