Transcript: ENSMUST00000016105.10 Adss2-201

Description

adenylosuccinate synthase 2 [Source:MGI Symbol;Acc:MGI:87948]

Gene Synonyms

AS, Adss

Location

Chromosome 1: 177,590,528-177,624,296 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 17 domains and features, is associated with 1724 variant alleles and maps to 278 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000015961.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000016105.10	Adss2-201	2990	456aa	ENSMUSP00000016105.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15555	B9EIE9 P46664	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000481017.1	Adss2-224	3011	463aa	ENSMUSP00000259380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000481005.1	Adss2-212	3003	444aa	ENSMUSP00000259368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000551413.1	Adss2-236	2984	454aa	ENSMUSP00000329776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSMUST00000481006.1	Adss2-213	2948	442aa	ENSMUSP00000259369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000480998.1	Adss2-205	2939	439aa	ENSMUSP00000259361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000481021.1	Adss2-228	2936	438aa	ENSMUSP00000259384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000481022.1	Adss2-229	2606	328aa	ENSMUSP00000259385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000480999.1	Adss2-206	3915	97aa	ENSMUSP00000259362.1	Nonsense mediated decay		-	-
ENSMUST00000481008.1	Adss2-215	3848	70aa	ENSMUSP00000259371.1	Nonsense mediated decay		-	-
ENSMUST00000481001.1	Adss2-208	3788	97aa	ENSMUSP00000259364.1	Nonsense mediated decay		-	-
ENSMUST00000481002.1	Adss2-209	3754	226aa	ENSMUSP00000259365.1	Nonsense mediated decay		-	-
ENSMUST00000481012.1	Adss2-219	3742	169aa	ENSMUSP00000259375.1	Nonsense mediated decay		-	-
ENSMUST00000481026.1	Adss2-233	3690	74aa	ENSMUSP00000259389.1	Nonsense mediated decay		-	-
ENSMUST00000481014.1	Adss2-221	3611	169aa	ENSMUSP00000259377.1	Nonsense mediated decay		-	-
ENSMUST00000481015.1	Adss2-222	3282	265aa	ENSMUSP00000259378.1	Nonsense mediated decay		-	-
ENSMUST00000481004.1	Adss2-211	3255	366aa	ENSMUSP00000259367.1	Nonsense mediated decay		-	-
ENSMUST00000481011.1	Adss2-218	3225	265aa	ENSMUSP00000259374.1	Nonsense mediated decay		-	-
ENSMUST00000481013.1	Adss2-220	2929	226aa	ENSMUSP00000259376.1	Nonsense mediated decay		-	-
ENSMUST00000481000.1	Adss2-207	2840	366aa	ENSMUSP00000259363.1	Nonsense mediated decay		-	-
ENSMUST00000480997.1	Adss2-204	2827	226aa	ENSMUSP00000259360.1	Nonsense mediated decay		-	-
ENSMUST00000481009.1	Adss2-216	2758	97aa	ENSMUSP00000259372.1	Nonsense mediated decay		-	-
ENSMUST00000481007.1	Adss2-214	2733	395aa	ENSMUSP00000259370.1	Nonsense mediated decay		-	-
ENSMUST00000481010.1	Adss2-217	2718	70aa	ENSMUSP00000259373.1	Nonsense mediated decay		-	-
ENSMUST00000481027.1	Adss2-234	2674	275aa	ENSMUSP00000259390.1	Nonsense mediated decay		-	-
ENSMUST00000481018.1	Adss2-225	2664	97aa	ENSMUSP00000259381.1	Nonsense mediated decay		-	-
ENSMUST00000481024.1	Adss2-231	2654	74aa	ENSMUSP00000259387.1	Nonsense mediated decay		-	-
ENSMUST00000481003.1	Adss2-210	2635	226aa	ENSMUSP00000259366.1	Nonsense mediated decay		-	-
ENSMUST00000481019.1	Adss2-226	2623	420aa	ENSMUSP00000259382.1	Nonsense mediated decay		-	-
ENSMUST00000481020.1	Adss2-227	2600	74aa	ENSMUSP00000259383.1	Nonsense mediated decay		-	-
ENSMUST00000481028.1	Adss2-235	2593	74aa	ENSMUSP00000259391.1	Nonsense mediated decay		-	-
ENSMUST00000481025.1	Adss2-232	2580	169aa	ENSMUSP00000259388.1	Nonsense mediated decay		-	-
ENSMUST00000481023.1	Adss2-230	2438	97aa	ENSMUSP00000259386.1	Nonsense mediated decay		-	-
ENSMUST00000481016.1	Adss2-223	2386	240aa	ENSMUSP00000259379.1	Nonsense mediated decay		-	-
ENSMUST00000159184.2	Adss2-202	2069	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000161808.2	Adss2-203	1733	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

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Transcript: ENSMUST00000016105.10 Adss2-201

Protein summary

Protein domains for ENSMUSP00000016105.9

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Transcript: ENSMUST00000016105.10 Adss2-201

Protein summary

Protein domains for ENSMUSP00000016105.9

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