Gene: Lhx5as1 ENSMUSG00000098649

Description

LIM homeobox 5, antisense 1 [Source:MGI Symbol;Acc:MGI:5521042]

Gene Synonyms

Gm27199, Gm31976

Location

Chromosome 5: 120,557,719-120,569,865 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 33 transcripts (splice variants), 3 orthologues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000185026.5	Lhx5as1-201	661	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000296167.1	Lhx5as1-213	1289	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000296163.1	Lhx5as1-209	1123	No protein	-	lncRNA	-
ENSMUST00000296168.1	Lhx5as1-214	991	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000296183.1	Lhx5as1-229	967	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000296173.1	Lhx5as1-219	965	No protein	-	lncRNA	-
ENSMUST00000296164.1	Lhx5as1-210	924	No protein	-	lncRNA	-
ENSMUST00000296172.1	Lhx5as1-218	867	No protein	-	lncRNA	-
ENSMUST00000296169.1	Lhx5as1-215	861	No protein	-	lncRNA	-
ENSMUST00000296166.1	Lhx5as1-212	820	No protein	-	lncRNA	-
ENSMUST00000296160.1	Lhx5as1-206	797	No protein	-	lncRNA	-
ENSMUST00000296187.1	Lhx5as1-233	790	No protein	-	lncRNA	-
ENSMUST00000296161.1	Lhx5as1-207	752	No protein	-	lncRNA	-
ENSMUST00000296165.1	Lhx5as1-211	743	No protein	-	lncRNA	-
ENSMUST00000296186.1	Lhx5as1-232	742	No protein	-	lncRNA	-
ENSMUST00000296180.1	Lhx5as1-226	718	No protein	-	lncRNA	-
ENSMUST00000296181.1	Lhx5as1-227	713	No protein	-	lncRNA	-
ENSMUST00000296159.1	Lhx5as1-205	692	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000296174.1	Lhx5as1-220	691	No protein	-	lncRNA	-
ENSMUST00000296162.1	Lhx5as1-208	667	No protein	-	lncRNA	-
ENSMUST00000296158.1	Lhx5as1-204	659	No protein	-	lncRNA	-
ENSMUST00000296185.1	Lhx5as1-231	641	No protein	-	lncRNA	-
ENSMUST00000296171.1	Lhx5as1-217	636	No protein	-	lncRNA	-
ENSMUST00000245245.2	Lhx5as1-203	617	No protein	-	lncRNA	-
ENSMUST00000240834.2	Lhx5as1-202	573	No protein	-	lncRNA	-
ENSMUST00000296170.1	Lhx5as1-216	573	No protein	-	lncRNA	-
ENSMUST00000296184.1	Lhx5as1-230	516	No protein	-	lncRNA	-
ENSMUST00000296177.1	Lhx5as1-223	480	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000296176.1	Lhx5as1-222	471	No protein	-	lncRNA	-
ENSMUST00000296178.1	Lhx5as1-224	420	No protein	-	lncRNA	-
ENSMUST00000296182.1	Lhx5as1-228	368	No protein	-	lncRNA	-
ENSMUST00000296175.1	Lhx5as1-221	364	No protein	-	lncRNA	-
ENSMUST00000296179.1	Lhx5as1-225	334	No protein	-	lncRNA	-

Gene: Lhx5as1 ENSMUSG00000098649

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Gene: Lhx5as1 ENSMUSG00000098649

Summary

About Us

Get help

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