Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: C130060C02Rik ENSMUSG00000097557

.

Description

RIKEN cDNA C130060C02 gene [Source:MGI Symbol;Acc:MGI:3041192]

Location

Chromosome 19: 15,962,402-15,993,572 forward strand.

GRCm39:CM001012.3

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000336783.1	C130060C02Rik-203	954	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000336790.1	C130060C02Rik-210	1874	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336789.1	C130060C02Rik-209	1368	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000181731.4	C130060C02Rik-201	1199	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000336784.1	C130060C02Rik-204	1023	No protein	-	lncRNA		-
ENSMUST00000336785.1	C130060C02Rik-205	1009	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336786.1	C130060C02Rik-206	904	No protein	-	lncRNA		-
ENSMUST00000240880.2	C130060C02Rik-202	701	No protein	-	lncRNA		-
ENSMUST00000336788.1	C130060C02Rik-208	678	No protein	-	lncRNA		-
ENSMUST00000336787.1	C130060C02Rik-207	583	No protein	-	lncRNA		-
ENSMUST00000336791.1	C130060C02Rik-211	417	No protein	-	lncRNA		-

.

Summary

.

.