Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: 4933440J02Rik ENSMUSG00000097082

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Description

RIKEN cDNA 4933440J02 gene [Source:MGI Symbol;Acc:MGI:1918571]

Location

Chromosome 10: 111,422,624-111,434,331 reverse strand.

GRCm39:CM001003.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000290135.1	4933440J02Rik-202	501	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000181547.3	4933440J02Rik-201	1224	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000290143.1	4933440J02Rik-210	952	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000290138.1	4933440J02Rik-205	731	No protein	-	lncRNA		-
ENSMUST00000290144.1	4933440J02Rik-211	687	No protein	-	lncRNA		-
ENSMUST00000290145.1	4933440J02Rik-212	642	No protein	-	lncRNA		-
ENSMUST00000290141.1	4933440J02Rik-208	499	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000290140.1	4933440J02Rik-207	487	No protein	-	lncRNA		-
ENSMUST00000290142.1	4933440J02Rik-209	487	No protein	-	lncRNA		-
ENSMUST00000290139.1	4933440J02Rik-206	452	No protein	-	lncRNA		-
ENSMUST00000290136.1	4933440J02Rik-203	433	No protein	-	lncRNA		-
ENSMUST00000290137.1	4933440J02Rik-204	374	No protein	-	lncRNA		-

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Summary

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