Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Vmn2r124 ENSMUSG00000094396

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Description

vomeronasal 2, receptor 124 [Source:MGI Symbol;Acc:MGI:3761531]

Gene Synonyms

Gm7196, Vmn2r-ps113

Location

Chromosome 17: 18,269,686-18,299,994 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 4 transcripts (splice variants), 127 orthologues and 128 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000176802.3	Vmn2r124-201	8140	855aa	ENSMUSP00000135613.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS70763	K7N789	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000231546.2	Vmn2r124-202	8145	183aa	ENSMUSP00000155888.2	Nonsense mediated decay		A0A338P6A4	-
ENSMUST00000233320.2	Vmn2r124-204	7499	180aa	ENSMUSP00000156537.2	Nonsense mediated decay		A0A3B2WCI4	-
ENSMUST00000233096.2	Vmn2r124-203	14813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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