Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm3685 ENSMUSG00000094021

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Description

predicted gene 3685 [Source:MGI Symbol;Acc:MGI:3781861]

Location

Chromosome 14: 15,423,279-15,433,254 forward strand.

GRCm39:CM001007.3

About this gene

This gene has 4 transcripts (splice variants), 32 orthologues and 154 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000249455.1	Gm3685-202	2670	276aa	ENSMUSP00000159762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000169215.8	Gm3685-201	984	204aa	ENSMUSP00000126624.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7N6U3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000249456.1	Gm3685-203	890	160aa	ENSMUSP00000159763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000249457.1	Gm3685-204	976	107aa	ENSMUSP00000159764.1	Nonsense mediated decay		-	-

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Summary

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