Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
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Ontologies
- GO: Anatomical entity
Phenotypes
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Gene: 4933438K21Rik ENSMUSG00000093617

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Description

RIKEN cDNA 4933438K21 gene [Source:MGI Symbol;Acc:MGI:1918520]

Location

Chromosome 4: 147,106,583-147,198,247 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000355388.1	4933438K21Rik-202	257	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000175787.3	4933438K21Rik-201	1732	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000355389.1	4933438K21Rik-203	815	No protein	-	lncRNA		-
ENSMUST00000355404.1	4933438K21Rik-218	738	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000355390.1	4933438K21Rik-204	721	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000355393.1	4933438K21Rik-207	704	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000355399.1	4933438K21Rik-213	645	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000355401.1	4933438K21Rik-215	632	No protein	-	lncRNA		-
ENSMUST00000355400.1	4933438K21Rik-214	486	No protein	-	lncRNA		-
ENSMUST00000355403.1	4933438K21Rik-217	435	No protein	-	lncRNA		-
ENSMUST00000355402.1	4933438K21Rik-216	422	No protein	-	lncRNA		-
ENSMUST00000355394.1	4933438K21Rik-208	390	No protein	-	lncRNA		-
ENSMUST00000355395.1	4933438K21Rik-209	388	No protein	-	lncRNA		-
ENSMUST00000355392.1	4933438K21Rik-206	383	No protein	-	lncRNA		-
ENSMUST00000355398.1	4933438K21Rik-212	323	No protein	-	lncRNA		-
ENSMUST00000355391.1	4933438K21Rik-205	319	No protein	-	lncRNA		-
ENSMUST00000355397.1	4933438K21Rik-211	305	No protein	-	lncRNA		-
ENSMUST00000355396.1	4933438K21Rik-210	303	No protein	-	lncRNA		-

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Summary

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