Gene: Churc1 ENSMUSG00000090258

Description

churchill domain containing 1 [Source:MGI Symbol;Acc:MGI:1923684]

Gene Synonyms

1700030P15Rik, My015, chch

Location

Chromosome 12: 76,812,312-76,829,954 forward strand.

GRCm39:CM001005.3

About this gene

This gene has 4 transcripts (splice variants), 176 orthologues and is associated with 16 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000041262.14	Churc1-201	676	112aa	ENSMUSP00000047015.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36478	Q6DG52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000110399.3	Churc1-202	535	70aa	ENSMUSP00000106029.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6DG52-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000126408.2	Churc1-203	462	35aa	ENSMUSP00000122587.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3Z553	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000152917.2	Churc1-204	5224	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Gene: Churc1 ENSMUSG00000090258

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Gene: Churc1 ENSMUSG00000090258

Summary

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