Gene: 5330434G04Rik ENSMUSG00000087620

Description

RIKEN cDNA 5330434G04 gene [Source:MGI Symbol;Acc:MGI:1925519]

Location

Chromosome X: 104,385,101-104,435,751 reverse strand.

GRCm39:CM001013.3

About this gene

This gene has 26 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000242500.2	5330434G04Rik-205	1777	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000136406.9	5330434G04Rik-202	3641	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000142109.10	5330434G04Rik-203	3508	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000150604.9	5330434G04Rik-204	3255	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000362914.1	5330434G04Rik-211	2344	No protein	-	lncRNA	-
ENSMUST00000362913.1	5330434G04Rik-210	2292	No protein	-	lncRNA	-
ENSMUST00000245086.1	5330434G04Rik-207	2284	No protein	-	lncRNA	-
ENSMUST00000362912.1	5330434G04Rik-209	2240	No protein	-	lncRNA	-
ENSMUST00000362923.1	5330434G04Rik-220	2146	No protein	-	lncRNA	-
ENSMUST00000362927.1	5330434G04Rik-224	1969	No protein	-	lncRNA	-
ENSMUST00000362928.1	5330434G04Rik-225	1950	No protein	-	lncRNA	-
ENSMUST00000362916.1	5330434G04Rik-213	1695	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362922.1	5330434G04Rik-219	1491	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362917.1	5330434G04Rik-214	1460	No protein	-	lncRNA	-
ENSMUST00000362921.1	5330434G04Rik-218	1451	No protein	-	lncRNA	-
ENSMUST00000362918.1	5330434G04Rik-215	1378	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362920.1	5330434G04Rik-217	1268	No protein	-	lncRNA	-
ENSMUST00000245154.2	5330434G04Rik-208	1243	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362919.1	5330434G04Rik-216	1221	No protein	-	lncRNA	-
ENSMUST00000362915.1	5330434G04Rik-212	1087	No protein	-	lncRNA	-
ENSMUST00000130264.4	5330434G04Rik-201	983	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000244039.2	5330434G04Rik-206	828	No protein	-	lncRNA	-
ENSMUST00000362926.1	5330434G04Rik-223	826	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362925.1	5330434G04Rik-222	817	No protein	-	lncRNA	-
ENSMUST00000362929.1	5330434G04Rik-226	709	No protein	-	lncRNA	-
ENSMUST00000362924.1	5330434G04Rik-221	522	No protein	-	lncRNA	-

Gene: 5330434G04Rik ENSMUSG00000087620

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Gene: 5330434G04Rik ENSMUSG00000087620

Summary

About Us

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