Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
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- GO: Anatomical entity
Phenotypes
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ID History
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Gene: 4930405A21Rik ENSMUSG00000086638

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Description

RIKEN cDNA 4930405A21 gene [Source:MGI Symbol;Acc:MGI:1922096]

Location

Chromosome 2: 156,538,197-156,562,834 reverse strand.

GRCm39:CM000995.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000130089.3	4930405A21Rik-201	918	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000282230.1	4930405A21Rik-203	1392	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282231.1	4930405A21Rik-204	1361	No protein	-	lncRNA		-
ENSMUST00000282241.1	4930405A21Rik-214	1235	No protein	-	lncRNA		-
ENSMUST00000139042.9	4930405A21Rik-202	995	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000282232.1	4930405A21Rik-205	900	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282237.1	4930405A21Rik-210	856	No protein	-	lncRNA		-
ENSMUST00000282240.1	4930405A21Rik-213	825	No protein	-	lncRNA		-
ENSMUST00000282238.1	4930405A21Rik-211	787	No protein	-	lncRNA		-
ENSMUST00000282239.1	4930405A21Rik-212	730	No protein	-	lncRNA		-
ENSMUST00000282235.1	4930405A21Rik-208	432	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282236.1	4930405A21Rik-209	417	No protein	-	lncRNA		-
ENSMUST00000282233.1	4930405A21Rik-206	376	No protein	-	lncRNA		-
ENSMUST00000282234.1	4930405A21Rik-207	347	No protein	-	lncRNA		-

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Summary

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