Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: 4930593C16Rik ENSMUSG00000086365

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Description

RIKEN cDNA 4930593C16 gene [Source:MGI Symbol;Acc:MGI:1925310]

Location

Chromosome 9: 120,751,002-120,759,950 reverse strand.

GRCm39:CM001002.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000273792.1	4930593C16Rik-203	1470	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000273793.1	4930593C16Rik-204	1572	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000273794.1	4930593C16Rik-205	1388	No protein	-	lncRNA		-
ENSMUST00000214011.3	4930593C16Rik-202	830	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000273795.1	4930593C16Rik-206	776	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000273797.1	4930593C16Rik-208	695	No protein	-	lncRNA		-
ENSMUST00000273798.1	4930593C16Rik-209	686	No protein	-	lncRNA		-
ENSMUST00000140589.4	4930593C16Rik-201	628	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000273796.1	4930593C16Rik-207	603	No protein	-	lncRNA		-
ENSMUST00000273803.1	4930593C16Rik-214	587	No protein	-	lncRNA		-
ENSMUST00000273801.1	4930593C16Rik-212	511	No protein	-	lncRNA		-
ENSMUST00000273800.1	4930593C16Rik-211	451	No protein	-	lncRNA		-
ENSMUST00000273802.1	4930593C16Rik-213	418	No protein	-	lncRNA		-
ENSMUST00000273799.1	4930593C16Rik-210	413	No protein	-	lncRNA		-

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Summary

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