Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Gene: Gm13003 ENSMUSG00000085833

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Description

predicted gene 13003 [Source:MGI Symbol;Acc:MGI:3650099]

Location

Chromosome 4: 136,866,647-136,894,209 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000298619.1	Gm13003-202	881	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000151040.4	Gm13003-201	2905	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000298624.1	Gm13003-207	2759	No protein	-	lncRNA		-
ENSMUST00000298625.1	Gm13003-208	2731	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000298623.1	Gm13003-206	2270	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000298622.1	Gm13003-205	1920	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000298627.1	Gm13003-210	910	No protein	-	lncRNA		-
ENSMUST00000298628.1	Gm13003-211	858	No protein	-	lncRNA		-
ENSMUST00000298630.1	Gm13003-213	841	No protein	-	lncRNA		-
ENSMUST00000298631.1	Gm13003-214	839	No protein	-	lncRNA		-
ENSMUST00000298629.1	Gm13003-212	753	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000298632.1	Gm13003-215	750	No protein	-	lncRNA		-
ENSMUST00000298620.1	Gm13003-203	749	No protein	-	lncRNA		-
ENSMUST00000298626.1	Gm13003-209	585	No protein	-	lncRNA		-
ENSMUST00000298634.1	Gm13003-217	541	No protein	-	lncRNA		-
ENSMUST00000298621.1	Gm13003-204	510	No protein	-	lncRNA		-
ENSMUST00000298633.1	Gm13003-216	415	No protein	-	lncRNA		-

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Summary

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