Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: 1700019G24Rik ENSMUSG00000085416

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Description

RIKEN cDNA 1700019G24 gene [Source:MGI Symbol;Acc:MGI:1919499]

Location

Chromosome 6: 5,942,868-5,977,444 reverse strand.

GRCm39:CM000999.3

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000335574.1	1700019G24Rik-202	582	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000335581.1	1700019G24Rik-209	750	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000335576.1	1700019G24Rik-204	701	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000130004.3	1700019G24Rik-201	586	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000335582.1	1700019G24Rik-210	586	No protein	-	lncRNA		-
ENSMUST00000335577.1	1700019G24Rik-205	535	No protein	-	lncRNA		-
ENSMUST00000335575.1	1700019G24Rik-203	489	No protein	-	lncRNA		-
ENSMUST00000335578.1	1700019G24Rik-206	455	No protein	-	lncRNA		-
ENSMUST00000335579.1	1700019G24Rik-207	442	No protein	-	lncRNA		-
ENSMUST00000335583.1	1700019G24Rik-211	439	No protein	-	lncRNA		-
ENSMUST00000335584.1	1700019G24Rik-212	429	No protein	-	lncRNA		-
ENSMUST00000335585.1	1700019G24Rik-213	388	No protein	-	lncRNA		-
ENSMUST00000335580.1	1700019G24Rik-208	372	No protein	-	lncRNA		-

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Summary

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