Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
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Phenotypes
Genetic Variation
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Molecular interactions
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ID History
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Gene: 2410004I01Rik ENSMUSG00000085338

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Description

RIKEN cDNA 2410004I01 gene [Source:MGI Symbol;Acc:MGI:1916989]

Location

Chromosome 11: 102,849,121-102,856,045 reverse strand.

GRCm39:CM001004.3

About this gene

This gene has 9 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000289940.1	2410004I01Rik-202	1149	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000138424.3	2410004I01Rik-201	1223	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000289941.1	2410004I01Rik-203	1123	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000289946.1	2410004I01Rik-208	1075	No protein	-	lncRNA		-
ENSMUST00000289942.1	2410004I01Rik-204	967	No protein	-	lncRNA		-
ENSMUST00000289944.1	2410004I01Rik-206	634	No protein	-	lncRNA		-
ENSMUST00000289943.1	2410004I01Rik-205	531	No protein	-	lncRNA		-
ENSMUST00000289945.1	2410004I01Rik-207	502	No protein	-	lncRNA		-
ENSMUST00000289947.1	2410004I01Rik-209	453	No protein	-	lncRNA		-

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Summary

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